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CD4 CD4 molecule [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 103165339, updated on 11-Mar-2024

Summary

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Gene symbol
CD4
Gene description
CD4 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X4
Exon count:
11
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) X4 NC_041752.1 (1375349..1385139)

Chromosome X4 - NC_041752.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114807840 Neighboring gene lymphocyte activating 3 Neighboring gene G protein-coupled receptor 162 Neighboring gene prolyl 3-hydroxylase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041752.1 Chromosome X4 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC class II protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interleukin-15-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041752.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    1375349..1385139
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029054490.2 → XP_028910323.1  T-cell surface glycoprotein CD4 isoform X1

    Conserved Domains (2) summary
    pfam12104
    Location:456 → 477
    Tcell_CD4_C; T cell CD4 receptor C terminal region
    cl11960
    Location:35 → 127
    Ig; Immunoglobulin domain

  2. XM_029054493.2 → XP_028910326.1  T-cell surface glycoprotein CD4 isoform X2

    Conserved Domains (2) summary
    pfam12104
    Location:455 → 476
    Tcell_CD4_C; T cell CD4 receptor C terminal region
    cl11960
    Location:35 → 127
    Ig; Immunoglobulin domain

  3. XM_029054494.2 → XP_028910327.1  T-cell surface glycoprotein CD4 isoform X3

    Conserved Domains (1) summary
    cl11960
    Location:35 → 127
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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