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casd1 CAS1 domain containing 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103152517, updated on 11-Mar-2024

Summary

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Gene symbol
casd1
Gene description
CAS1 domain containing 1
See related
Ensembl:ENSPFOG00000012384
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800252.1 (88271..101024, complement)

NW_006800252.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107833041 Neighboring gene protein phosphatase 1, regulatory subunit 9A Neighboring gene uncharacterized LOC103152515 Neighboring gene sarcoglycan, epsilon Neighboring gene collagen, type I, alpha 2 Neighboring gene uncharacterized LOC103152521 Neighboring gene Bet1 golgi vesicular membrane trafficking protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800252.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CAS1 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800252.1 Reference Poecilia_formosa-5.1.2

    Range
    88271..101024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007573006.2 → XP_007573068.1  CAS1 domain-containing protein 1

    UniProtKB/TrEMBL
    A0A087Y3I3
    Related
    ENSPFOP00000012586.1, ENSPFOT00000012603.1
    Conserved Domains (2) summary
    pfam07779
    Location:334 → 809
    Cas1_AcylT; 10 TM Acyl Transferase domain found in Cas1p
    cl01053
    Location:108 → 327
    SGNH_hydrolase; SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely ...
Nucleotide Protein
Heading Accession and Version

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