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tbx3a T-box transcription factor 3a [ Poecilia formosa (Amazon molly) ]

Gene ID: 103149623, updated on 11-Mar-2024

Summary

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Gene symbol
tbx3a
Gene description
T-box transcription factor 3a
See related
Ensembl:ENSPFOG00000024759
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
tbx3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799945.1 (4634219..4642964, complement)

NW_006799945.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103149609 Neighboring gene T-box transcription factor 5a Neighboring gene uncharacterized LOC107838396 Neighboring gene uncharacterized LOC107838276

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799945.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac chamber development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart looping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-box transcription factor TBX3
Names
T-box 3
T-box transcription factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799945.1 Reference Poecilia_formosa-5.1.2

    Range
    4634219..4642964 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007568883.2 → XP_007568945.1  T-box transcription factor TBX3 isoform X2

    Conserved Domains (2) summary
    pfam12598
    Location:304 → 392
    TBX; T-box transcription factor
    cd00182
    Location:105 → 288
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...

  2. XM_007568875.2 → XP_007568937.1  T-box transcription factor TBX3 isoform X1

    UniProtKB/TrEMBL
    A0A096LXJ4
    Related
    ENSPFOP00000023885.1, ENSPFOT00000025205.1
    Conserved Domains (2) summary
    pfam12598
    Location:309 → 397
    TBX; T-box transcription factor
    cd00182
    Location:105 → 293
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
Nucleotide Protein
Heading Accession and Version

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