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stbd1 starch binding domain 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103144580, updated on 11-Mar-2024

Summary

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Gene symbol
stbd1
Gene description
starch binding domain 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See stbd1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800068.1 (1549197..1554451)

NW_006800068.1Genomic Context describing neighboring genes Neighboring gene protein kinase, AMP-activated, beta 1 non-catalytic subunit, a Neighboring gene PHD finger protein 24 Neighboring gene phospholipid-transporting ATPase ID-like Neighboring gene lysophosphatidic acid receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800068.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800068.1 Reference Poecilia_formosa-5.1.2

    Range
    1549197..1554451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007561635.2 → XP_007561697.1  starch-binding domain-containing protein 1

    Conserved Domains (1) summary
    cl15347
    Location:785 → 878
    CBM20; The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is ...
Nucleotide Protein
Heading Accession and Version

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