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ppp1r10 protein phosphatase 1, regulatory subunit 10 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103142791, updated on 11-Mar-2024

Summary

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Gene symbol
ppp1r10
Gene description
protein phosphatase 1, regulatory subunit 10
See related
Ensembl:ENSPFOG00000016442
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See ppp1r10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800040.1 (81643..90919)

NW_006800040.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family F (GCN20), member 1 Neighboring gene uncharacterized LOC107836984 Neighboring gene mitochondrial ribosomal protein S18B Neighboring gene death-associated protein kinase 2-like Neighboring gene anterior gradient 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800040.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 1 regulatory subunit 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800040.1 Reference Poecilia_formosa-5.1.2

    Range
    81643..90919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016674786.1 → XP_016530272.1  serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1

    Conserved Domains (2) summary
    pfam00642
    Location:758 → 782
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    cl00146
    Location:102 → 145
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  2. XM_016674787.1 → XP_016530273.1  serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X2

    UniProtKB/TrEMBL
    A0A087YEV3
    Related
    ENSPFOP00000016556.2, ENSPFOT00000016578.2
    Conserved Domains (2) summary
    pfam00642
    Location:757 → 781
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    cl00146
    Location:102 → 145
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
Nucleotide Protein
Heading Accession and Version

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