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snx8a sorting nexin 8a [ Poecilia formosa (Amazon molly) ]

Gene ID: 103142248, updated on 11-Mar-2024

Summary

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Gene symbol
snx8a
Gene description
sorting nexin 8a
See related
Ensembl:ENSPFOG00000015107
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
snx8
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800033.1 (2097722..2109851)

NW_006800033.1Genomic Context describing neighboring genes Neighboring gene tweety family member 3 Neighboring gene uncharacterized LOC107836877 Neighboring gene protein tweety homolog 3-like Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 1 Neighboring gene mitochondrial rRNA methyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800033.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-8
Names
sorting nexin 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800033.1 Reference Poecilia_formosa-5.1.2

    Range
    2097722..2109851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016674402.1 → XP_016529888.1  sorting nexin-8

    UniProtKB/TrEMBL
    A0A087YAY6, A0A096LT95
    Conserved Domains (3) summary
    cd06866
    Location:134 → 243
    PX_SNX8_Mvp1p_like; The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p
    cd07597
    Location:260 → 504
    BAR_SNX8; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 8
    smart00027
    Location:17 → 101
    EH; Eps15 homology domain

  2. XM_007558202.2 → XP_007558264.1  sorting nexin-8

    UniProtKB/TrEMBL
    A0A087YAY6, A0A096LT95
    Related
    ENSPFOP00000015189.2, ENSPFOT00000015211.2
    Conserved Domains (3) summary
    cd06866
    Location:134 → 243
    PX_SNX8_Mvp1p_like; The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p
    cd07597
    Location:260 → 504
    BAR_SNX8; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 8
    smart00027
    Location:17 → 101
    EH; Eps15 homology domain
Nucleotide Protein
Heading Accession and Version

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