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lingo2 leucine rich repeat and Ig domain containing 2 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103137357, updated on 11-Mar-2024

Summary

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Gene symbol
lingo2
Gene description
leucine rich repeat and Ig domain containing 2
See related
Ensembl:ENSPFOG00000020535
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799978.1 (3025917..3219914)

NW_006799978.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107836104 Neighboring gene uncharacterized LOC103137355 Neighboring gene uncharacterized LOC103137356 Neighboring gene uncharacterized LOC107836106 Neighboring gene uncharacterized LOC107836107 Neighboring gene uncharacterized LOC107836099 Neighboring gene uncharacterized LOC103137359

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799978.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799978.1 Reference Poecilia_formosa-5.1.2

    Range
    3025917..3219914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007551070.2 → XP_007551132.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    See identical proteins and their annotated locations for XP_007551132.1

    UniProtKB/TrEMBL
    A0A087YRK8
    Conserved Domains (6) summary
    cd00116
    Location:70 → 341
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:424 → 508
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:67 → 90
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:306 → 365
    LRR_8; Leucine rich repeat
    cl11960
    Location:433 → 501
    Ig; Immunoglobulin domain
    cl15307
    Location:363 → 399
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  2. XM_016670940.1 → XP_016526426.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    UniProtKB/TrEMBL
    A0A087YRK8
    Conserved Domains (6) summary
    cd00116
    Location:70 → 341
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:424 → 508
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:67 → 90
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:306 → 365
    LRR_8; Leucine rich repeat
    cl11960
    Location:433 → 501
    Ig; Immunoglobulin domain
    cl15307
    Location:363 → 399
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  3. XM_016670939.1 → XP_016526425.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    UniProtKB/TrEMBL
    A0A087YRK8
    Conserved Domains (6) summary
    cd00116
    Location:70 → 341
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:424 → 508
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:67 → 90
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:306 → 365
    LRR_8; Leucine rich repeat
    cl11960
    Location:433 → 501
    Ig; Immunoglobulin domain
    cl15307
    Location:363 → 399
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  4. XM_007551069.2 → XP_007551131.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    See identical proteins and their annotated locations for XP_007551131.1

    UniProtKB/TrEMBL
    A0A087YRK8
    Conserved Domains (6) summary
    cd00116
    Location:70 → 341
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:424 → 508
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:67 → 90
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:306 → 365
    LRR_8; Leucine rich repeat
    cl11960
    Location:433 → 501
    Ig; Immunoglobulin domain
    cl15307
    Location:363 → 399
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  5. XM_007551071.2 → XP_007551133.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    See identical proteins and their annotated locations for XP_007551133.1

    UniProtKB/TrEMBL
    A0A087YRK8
    Related
    ENSPFOP00000020661.2, ENSPFOT00000020685.1
    Conserved Domains (6) summary
    cd00116
    Location:70 → 341
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:424 → 508
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:67 → 90
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:306 → 365
    LRR_8; Leucine rich repeat
    cl11960
    Location:433 → 501
    Ig; Immunoglobulin domain
    cl15307
    Location:363 → 399
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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