U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

atp13a3 ATPase 13A3 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103130591, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
atp13a3
Gene description
ATPase 13A3
See related
Ensembl:ENSPFOG00000023305
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799949.1 (3413055..3446002, complement)

NW_006799949.1Genomic Context describing neighboring genes Neighboring gene hairy-related 6 Neighboring gene OPA1 mitochondrial dynamin like GTPase Neighboring gene transmembrane protein 44 Neighboring gene large 60S subunit nuclear export GTPase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006799949.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type ion transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in polyamine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable cation-transporting ATPase 13A3
Names
ATPase type 13A3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799949.1 Reference Poecilia_formosa-5.1.2

    Range
    3413055..3446002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007542037.2 → XP_007542099.1  probable cation-transporting ATPase 13A3 isoform X2

    UniProtKB/TrEMBL
    A0A096LTM8
    Conserved Domains (6) summary
    smart00831
    Location:182 → 245
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    COG4087
    Location:872 → 915
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01657
    Location:14 → 1161
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
    pfam00122
    Location:255 → 502
    E1-E2_ATPase; E1-E2 ATPase
    pfam12409
    Location:13 → 163
    P5-ATPase; P5-type ATPase cation transporter
    pfam13246
    Location:621 → 682
    Cation_ATPase; Cation transport ATPase (P-type)

  2. XM_007542029.2 → XP_007542091.1  probable cation-transporting ATPase 13A3 isoform X1

    UniProtKB/TrEMBL
    A0A096LTM8, A0A096M1U8
    Related
    ENSPFOP00000025389.1, ENSPFOT00000024490.1
    Conserved Domains (6) summary
    smart00831
    Location:182 → 245
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    COG4087
    Location:872 → 915
    COG4087; Soluble P-type ATPase [General function prediction only]
    TIGR01657
    Location:14 → 1161
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)
    pfam00122
    Location:255 → 502
    E1-E2_ATPase; E1-E2 ATPase
    pfam12409
    Location:13 → 163
    P5-ATPase; P5-type ATPase cation transporter
    pfam13246
    Location:621 → 682
    Cation_ATPase; Cation transport ATPase (P-type)

  3. XM_016665577.1 → XP_016521063.1  probable cation-transporting ATPase 13A3 isoform X3

    UniProtKB/TrEMBL
    A0A096LTM8
    Related
    ENSPFOP00000022519.1, ENSPFOT00000028143.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.