U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GNPDA2 glucosamine-6-phosphate deaminase 2 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103128764, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
GNPDA2
Gene description
glucosamine-6-phosphate deaminase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 3 NC_080164.1 (150313570..150341090)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006803960.1 (1202760..1226858, complement)

Chromosome 3 - NC_080164.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene U1 spliceosomal RNA Neighboring gene GTP binding elongation factor GUF1 Neighboring gene Yip1 domain family member 7

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glucosamine-6-phosphate isomerase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080164.1 Reference mEriEur2.1

    Range
    150313570..150341090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060188108.1 → XP_060044091.1  glucosamine-6-phosphate isomerase 2 isoform X2

  2. XM_007539674.3 → XP_007539736.2  glucosamine-6-phosphate isomerase 2 isoform X4

    UniProtKB/TrEMBL
    A0A1S2ZYC2, A0A1S3ASH1
    Conserved Domains (1) summary
    cl00339
    Location:4 → 222
    SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...

  3. XM_060188107.1 → XP_060044090.1  glucosamine-6-phosphate isomerase 2 isoform X1

  4. XM_060188109.1 → XP_060044092.1  glucosamine-6-phosphate isomerase 2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.