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LY6D lymphocyte antigen 6 family member D [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103124656, updated on 11-Mar-2024

Summary

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Gene symbol
LY6D
Gene description
lymphocyte antigen 6 family member D
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 8 NC_080169.1 (11374308..11375944)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006803948.1 (2074197..2075431, complement)

Chromosome 8 - NC_080169.1Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 6 family member K Neighboring gene candoxin-like Neighboring gene Ly6/neurotoxin 1 Neighboring gene secreted LY6/PLAUR domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lymphocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lymphocyte antigen 6D
Names
lymphocyte antigen 6 complex, locus D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080169.1 Reference mEriEur2.1

    Range
    11374308..11375944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060195892.1 → XP_060051875.1  lymphocyte antigen 6D isoform X2

  2. XM_007535391.2 → XP_007535453.1  lymphocyte antigen 6D isoform X1

    UniProtKB/TrEMBL
    A0A1S3AI51
    Conserved Domains (1) summary
    cd00117
    Location:21 → 95
    LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
Nucleotide Protein
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