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ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103118405, updated on 11-Mar-2024

Summary

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Gene symbol
ADAMTS20
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 5 NC_080166.1 (122974539..123114377)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804312.1 (2184021..2274650)

Chromosome 5 - NC_080166.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor associated kinase 4 Neighboring gene pseudouridine synthase 7 like Neighboring gene uncharacterized LOC132538653 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC132538732 Neighboring gene small nucleolar RNA SNORA17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080166.1 Reference mEriEur2.1

    Range
    122974539..123114377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060191745.1 → XP_060047728.1  A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X1

  2. XM_060191746.1 → XP_060047729.1  A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X2

  3. XM_060191747.1 → XP_060047730.1  A disintegrin and metalloproteinase with thrombospondin motifs 20 isoform X3

RNA

  1. XR_009550014.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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