U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRG4 proteoglycan 4 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103114169, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PRG4
Gene description
proteoglycan 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 9 NC_080170.1 (48523383..48543593)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804139.1 (982927..1002658, complement)

Chromosome 9 - NC_080170.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene hemicentin 1 Neighboring gene nucleoside diphosphate kinase B-like Neighboring gene translocated promoter region, nuclear basket protein Neighboring gene odr-4 GPCR localization factor homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polysaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
proteoglycan 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080170.1 Reference mEriEur2.1

    Range
    48523383..48543593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060197859.1 → XP_060053842.1  proteoglycan 4 isoform X13

  2. XM_060197856.1 → XP_060053839.1  proteoglycan 4 isoform X11

  3. XM_060197857.1 → XP_060053840.1  proteoglycan 4 isoform X12

  4. XM_060197852.1 → XP_060053835.1  proteoglycan 4 isoform X7

  5. XM_060197855.1 → XP_060053838.1  proteoglycan 4 isoform X10

  6. XM_060197845.1 → XP_060053828.1  proteoglycan 4 isoform X1

  7. XM_060197850.1 → XP_060053833.1  proteoglycan 4 isoform X5

  8. XM_060197854.1 → XP_060053837.1  proteoglycan 4 isoform X9

  9. XM_060197851.1 → XP_060053834.1  proteoglycan 4 isoform X6

  10. XM_060197846.1 → XP_060053829.1  proteoglycan 4 isoform X2

  11. XM_060197853.1 → XP_060053836.1  proteoglycan 4 isoform X8

  12. XM_060197848.1 → XP_060053831.1  proteoglycan 4 isoform X3

  13. XM_060197849.1 → XP_060053832.1  proteoglycan 4 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.