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CHODL chondrolectin [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103111936, updated on 11-Mar-2024

Summary

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Gene symbol
CHODL
Gene description
chondrolectin
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 14 NC_080175.1 (59518252..59549192)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804068.1 (40024..60778)

Chromosome 14 - NC_080175.1Genomic Context describing neighboring genes Neighboring gene chromosome 14 C21orf91 homolog Neighboring gene nuclear inhibitor of protein phosphatase 1-like Neighboring gene transmembrane serine protease 15 Neighboring gene uncharacterized LOC132532667

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondrolectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080175.1 Reference mEriEur2.1

    Range
    59518252..59549192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060171949.1 → XP_060027932.1  chondrolectin isoform X1

    UniProtKB/TrEMBL
    A0A1S2ZLS9

  2. XM_060171950.1 → XP_060027933.1  chondrolectin isoform X2

  3. XM_007521283.2 → XP_007521345.1  chondrolectin isoform X1

    UniProtKB/TrEMBL
    A0A1S2ZLS9
    Conserved Domains (1) summary
    cl02432
    Location:28 → 180
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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