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WNT5A Wnt family member 5A [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103111827, updated on 11-Mar-2024

Summary

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Gene symbol
WNT5A
Gene description
Wnt family member 5A
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) Unplaced Scaffold NW_026647395.1 (7255..31322, complement)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804065.1 (986377..1005586, complement)

NW_026647395.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Wnt-5a
Names
wingless-type MMTV integration site family, member 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NW_026647395.1 Reference mEriEur2.1

    Range
    7255..31322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016187292.2 → XP_016042778.1  protein Wnt-5a isoform X3

    UniProtKB/TrEMBL
    A0A1S3W8G4
    Conserved Domains (1) summary
    pfam00110
    Location:75 → 380
    wnt; wnt family

  2. XM_060183971.1 → XP_060039954.1  protein Wnt-5a isoform X1

  3. XM_060183972.1 → XP_060039955.1  protein Wnt-5a isoform X2

  4. XM_007521173.3 → XP_007521235.1  protein Wnt-5a isoform X4

    UniProtKB/TrEMBL
    A0A1S2ZLI0
    Conserved Domains (1) summary
    pfam00110
    Location:55 → 360
    wnt; wnt family

  5. XM_060183973.1 → XP_060039956.1  protein Wnt-5a isoform X4

    UniProtKB/TrEMBL
    A0A1S2ZLI0
Nucleotide Protein
Heading Accession and Version

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