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IFT27 intraflagellar transport 27 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103110182, updated on 11-Mar-2024

Summary

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Gene symbol
IFT27
Gene description
intraflagellar transport 27
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 4 NC_080165.1 (20299195..20319707, complement)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804026.1 (3396944..3417397)

Chromosome 4 - NC_080165.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit D Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene parvalbumin Neighboring gene neutrophil cytosolic factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 27 homolog
Names
intraflagellar transport 27 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080165.1 Reference mEriEur2.1

    Range
    20299195..20319707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007519359.3 → XP_007519421.1  intraflagellar transport protein 27 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1S2ZHE9
    Conserved Domains (2) summary
    pfam00071
    Location:7 → 170
    Ras; Ras family
    cl21455
    Location:6 → 172
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_060188891.1 → XP_060044874.1  intraflagellar transport protein 27 homolog isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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