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TNS1 tensin 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103090286, updated on 11-Mar-2024

Summary

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Gene symbol
TNS1
Gene description
tensin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
37
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006778097.1 (374732..605779)

NW_006778097.1Genomic Context describing neighboring genes Neighboring gene C-X-C motif chemokine receptor 2 Neighboring gene RUN and FYVE domain containing 4 Neighboring gene potassium-transporting ATPase alpha chain 2-like Neighboring gene transition protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006778097 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fibroblast migration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tensin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006778097.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    374732..605779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007451428.1 → XP_007451490.1  tensin-1

    UniProtKB/TrEMBL
    A0A340WX93
    Conserved Domains (5) summary
    cd09927
    Location:1619 → 1734
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    smart00404
    Location:246 → 361
    PTPc_motif; Protein tyrosine phosphatase, catalytic domain motif
    cd01213
    Location:1756 → 1889
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:348 → 474
    PTEN_C2; C2 domain of PTEN tumour-suppressor protein
    cl00040
    Location:75 → 108
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...

  2. XM_007451429.1 → XP_007451491.1  tensin-1

    UniProtKB/TrEMBL
    A0A340WRM4
    Conserved Domains (4) summary
    cd09927
    Location:1450 → 1565
    SH2_Tensin_like; Src homology 2 domain found in Tensin-like proteins
    smart00404
    Location:77 → 192
    PTPc_motif; Protein tyrosine phosphatase, catalytic domain motif
    cd01213
    Location:1587 → 1720
    PTB_tensin; Tensin Phosphotyrosine-binding (PTB) domain
    pfam10409
    Location:179 → 305
    PTEN_C2; C2 domain of PTEN tumour-suppressor protein
Nucleotide Protein
Heading Accession and Version

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