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RPRD2 regulation of nuclear pre-mRNA domain containing 2 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103088575, updated on 11-Mar-2024

Summary

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Gene symbol
RPRD2
Gene description
regulation of nuclear pre-mRNA domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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See RPRD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006790288.1 (609699..691351)

NW_006790288.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S21 Neighboring gene pre-mRNA processing factor 3 Neighboring gene threonyl-tRNA synthetase 2, mitochondrial Neighboring gene extracellular matrix protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006790288 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II C-terminal domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, holoenzyme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulation of nuclear pre-mRNA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006790288.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    609699..691351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007463506.1 → XP_007463568.1  regulation of nuclear pre-mRNA domain-containing protein 2

    UniProtKB/TrEMBL
    A0A340XQC8
    Conserved Domains (1) summary
    smart00582
    Location:26 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  2. XM_007463508.1 → XP_007463570.1  regulation of nuclear pre-mRNA domain-containing protein 2

    UniProtKB/TrEMBL
    A0A340XWL8
    Conserved Domains (1) summary
    smart00582
    Location:26 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  3. XM_007463507.1 → XP_007463569.1  regulation of nuclear pre-mRNA domain-containing protein 2

    UniProtKB/TrEMBL
    A0A340XW41
    Conserved Domains (1) summary
    cl02544
    Location:2 → 108
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
Nucleotide Protein
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