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HMG20A high mobility group 20A [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103085764, updated on 11-Mar-2024

Summary

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Gene symbol
HMG20A
Gene description
high mobility group 20A
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006797029.1 (629383..697442)

NW_006797029.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 3 Neighboring gene pseudopodium enriched atypical kinase 1 Neighboring gene histone H1.0-like Neighboring gene leucine rich repeat and Ig domain containing 1 Neighboring gene ciliary microtubule associated protein 1C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006797029 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high mobility group protein 20A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006797029.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    629383..697442
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007469164.1 → XP_007469226.1  high mobility group protein 20A

    See identical proteins and their annotated locations for XP_007469226.1

    UniProtKB/TrEMBL
    A0A340Y6B2
    Conserved Domains (2) summary
    cd01390
    Location:103 → 168
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
    pfam17380
    Location:77 → 313
    DUF5401; Family of unknown function (DUF5401)
Nucleotide Protein
Heading Accession and Version

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