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ATXN10 ataxin 10 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103083760, updated on 11-Mar-2024

Summary

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Gene symbol
ATXN10
Gene description
ataxin 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006780611.1 (4088528..4246924, complement)

NW_006780611.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103085697 Neighboring gene Wnt family member 7B Neighboring gene fibulin 1 Neighboring gene actin-related protein 2/3 complex subunit 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006780611 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006780611.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    4088528..4246924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007453909.1 → XP_007453971.1  ataxin-10

    UniProtKB/TrEMBL
    A0A340WY29
    Conserved Domains (2) summary
    cd00020
    Location:63 → 181
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam09759
    Location:370 → 467
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain
Nucleotide Protein
Heading Accession and Version

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