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LRRC1 leucine rich repeat containing 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103082422, updated on 11-Mar-2024

Summary

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Gene symbol
LRRC1
Gene description
leucine rich repeat containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006787800.1 (1051128..1177294, complement)

NW_006787800.1Genomic Context describing neighboring genes Neighboring gene tubulointerstitial nephritis antigen Neighboring gene muscular LMNA-interacting protein Neighboring gene kelch like family member 31 Neighboring gene glutamate-cysteine ligase catalytic subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006787800 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter receptor transport postsynaptic membrane to endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006787800.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    1051128..1177294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007460799.1 → XP_007460861.1  leucine-rich repeat-containing protein 1

    UniProtKB/TrEMBL
    A0A340XHC3
    Conserved Domains (3) summary
    cd00116
    Location:15 → 232
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:61 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:36 → 94
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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