U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

WIPI2 WD repeat domain, phosphoinositide interacting 2 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103078314, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
WIPI2
Gene description
WD repeat domain, phosphoinositide interacting 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006771655.1 (638025..669086, complement)

NW_006771655.1Genomic Context describing neighboring genes Neighboring gene trinucleotide repeat containing 18 Neighboring gene solute carrier family 29 member 4 Neighboring gene monocyte to macrophage differentiation associated 2 Neighboring gene poly(A) polymerase alpha-like Neighboring gene Rap associating with DIL domain

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006771655 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WD repeat domain phosphoinositide-interacting protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006771655.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    638025..669086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007447083.1 → XP_007447145.1  WD repeat domain phosphoinositide-interacting protein 2

    UniProtKB/TrEMBL
    A0A340WJG7
    Conserved Domains (3) summary
    COG2319
    Location:21 → 272
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:58 → 99
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:166 → 345
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_007447084.1 → XP_007447146.1  WD repeat domain phosphoinositide-interacting protein 2

    UniProtKB/TrEMBL
    A0A340WEV1
    Conserved Domains (3) summary
    COG2319
    Location:21 → 272
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:58 → 99
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:166 → 345
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.