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HSF2 heat shock transcription factor 2 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103077992, updated on 11-Mar-2024

Summary

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Gene symbol
HSF2
Gene description
heat shock transcription factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006781997.1 (308149..344284, complement)

NW_006781997.1Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase inhibitor beta Neighboring gene serine incorporator 1 Neighboring gene TNF receptor-associated factor 1-like Neighboring gene gap junction protein alpha 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006781997 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock factor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006781997.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    308149..344284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007454902.1 → XP_007454964.1  heat shock factor protein 2

    UniProtKB/TrEMBL
    A0A340X6N4
    Conserved Domains (2) summary
    smart00415
    Location:6 → 110
    HSF; heat shock factor
    pfam06546
    Location:230 → 492
    Vert_HS_TF; Vertebrate heat shock transcription factor

  2. XM_007454901.1 → XP_007454963.1  heat shock factor protein 2

    UniProtKB/TrEMBL
    A0A340X013
    Conserved Domains (2) summary
    smart00415
    Location:6 → 110
    HSF; heat shock factor
    pfam06546
    Location:230 → 510
    Vert_HS_TF; Vertebrate heat shock transcription factor
Nucleotide Protein
Heading Accession and Version

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