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ZIC1 Zic family member 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103071743, updated on 11-Mar-2024

Summary

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Gene symbol
ZIC1
Gene description
Zic family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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See ZIC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006782180.1 (321948..327781)

NW_006782180.1Genomic Context describing neighboring genes Neighboring gene Zic family member 4 Neighboring gene 60S ribosomal protein L23a-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006782180 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZIC 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006782180.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    321948..327781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007455022.1 → XP_007455084.1  zinc finger protein ZIC 1

    See identical proteins and their annotated locations for XP_007455084.1

    UniProtKB/TrEMBL
    A0A340X729
    Conserved Domains (3) summary
    COG5189
    Location:298 → 382
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:276 → 296
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam18366
    Location:219 → 264
    zf_ZIC; Zic proteins zinc finger domain
Nucleotide Protein
Heading Accession and Version

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