U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PSMA1 proteasome 20S subunit alpha 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103069007, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PSMA1
Gene description
proteasome 20S subunit alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006787493.1 (357107..369460)

NW_006787493.1Genomic Context describing neighboring genes Neighboring gene dynein, light chain, LC8-type 1 pseudogene Neighboring gene phosphodiesterase 3B Neighboring gene ubiquitin-conjugating enzyme E2D 3 pseudogene Neighboring gene COPI coat complex subunit beta 1 Neighboring gene RAS related 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006787493 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
proteasome subunit alpha type-1
Names
proteasome subunit alpha 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006787493.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    357107..369460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007460215.1 → XP_007460277.1  proteasome subunit alpha type-1

    See identical proteins and their annotated locations for XP_007460277.1

    UniProtKB/TrEMBL
    A0A340XJI6
    Conserved Domains (1) summary
    cd03749
    Location:6 → 216
    proteasome_alpha_type_1; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.