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L1CAM L1 cell adhesion molecule [ Python bivittatus (Burmese python) ]

Gene ID: 103064807, updated on 11-Mar-2024

Summary

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Gene symbol
L1CAM
Gene description
L1 cell adhesion molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532045.1 (139606..215682, complement)

NW_006532045.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene signal sequence receptor subunit 4 Neighboring gene PDZ domain containing 4 Neighboring gene uncharacterized LOC103065362 Neighboring gene arginine vasopressin receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006532045 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neural cell adhesion molecule L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532045.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    139606..215682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025165711.1 → XP_025021479.1  neural cell adhesion molecule L1 isoform X4

    UniProtKB/TrEMBL
    A0A9F5IVE3
    Conserved Domains (6) summary
    smart00410
    Location:521 → 606
    IG_like; Immunoglobulin like
    cd00063
    Location:610 → 697
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:921 → 1004
    fn3; Fibronectin type III domain
    pfam13882
    Location:1144 → 1233
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:441 → 508
    Ig; Immunoglobulin domain
    cl11960
    Location:134 → 225
    Ig; Immunoglobulin domain

  2. XM_025165709.1 → XP_025021477.1  neural cell adhesion molecule L1 isoform X3

    UniProtKB/TrEMBL
    A0A9F5ILA7
    Conserved Domains (6) summary
    smart00410
    Location:526 → 611
    IG_like; Immunoglobulin like
    cd00063
    Location:615 → 702
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:926 → 1009
    fn3; Fibronectin type III domain
    pfam13882
    Location:1149 → 1234
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:446 → 513
    Ig; Immunoglobulin domain
    cl11960
    Location:139 → 230
    Ig; Immunoglobulin domain

  3. XM_025165702.1 → XP_025021470.1  neural cell adhesion molecule L1 isoform X2

    UniProtKB/TrEMBL
    A0A9F5MRU2
    Conserved Domains (6) summary
    smart00410
    Location:526 → 611
    IG_like; Immunoglobulin like
    cd00063
    Location:615 → 702
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:926 → 1009
    fn3; Fibronectin type III domain
    pfam13882
    Location:1149 → 1234
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:446 → 513
    Ig; Immunoglobulin domain
    cl11960
    Location:139 → 230
    Ig; Immunoglobulin domain

  4. XM_025165698.1 → XP_025021466.1  neural cell adhesion molecule L1 isoform X1

    UniProtKB/TrEMBL
    A0A9F5IYR7
    Conserved Domains (6) summary
    smart00410
    Location:526 → 611
    IG_like; Immunoglobulin like
    cd00063
    Location:615 → 702
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:926 → 1009
    fn3; Fibronectin type III domain
    pfam13882
    Location:1149 → 1238
    Bravo_FIGEY; Bravo-like intracellular region
    cd00096
    Location:446 → 513
    Ig; Immunoglobulin domain
    cl11960
    Location:139 → 230
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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