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LOC103054931 ranBP-type and C3HC4-type zinc finger-containing protein 1 [ Python bivittatus (Burmese python) ]

Gene ID: 103054931, updated on 23-Oct-2023

Summary

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Gene symbol
LOC103054931
Gene description
ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Also known as
RBCK1
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006538850.1 (274..11261, complement)

NW_006538850.1Genomic Context describing neighboring genes Neighboring gene tribbles pseudokinase 3 Neighboring gene neurensin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006538850 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein linear polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of LUBAC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ranBP-type and C3HC4-type zinc finger-containing protein 1; uncharacterized protein LOC103054931
Names
RANBP2-type and C3HC4-type zinc finger containing 1
RanBP-type and C3HC4-type zinc finger containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006538850.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    274..11261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025175800.1 → XP_025031568.1  ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9F5N6K6
    Conserved Domains (1) summary
    cl00155
    Location:57 → 131
    UBQ; Ubiquitin-like proteins

  2. XM_025175803.1 → XP_025031571.1  ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9F5N6K6
    Conserved Domains (1) summary
    cl00155
    Location:57 → 131
    UBQ; Ubiquitin-like proteins

  3. XM_025175799.1 → XP_025031567.1  ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9F5N4Q0
    Conserved Domains (1) summary
    cl00155
    Location:101 → 175
    UBQ; Ubiquitin-like proteins

  4. XM_007442397.3 → XP_007442459.2  ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9F5N6K6
    Conserved Domains (1) summary
    cl00155
    Location:57 → 131
    UBQ; Ubiquitin-like proteins

  5. XM_025175802.1 → XP_025031570.1  uncharacterized protein LOC103054931 isoform X3

    UniProtKB/TrEMBL
    A0A9F5ITV3
    Conserved Domains (2) summary
    pfam11199
    Location:41 → 87
    DUF2891; Protein of unknown function (DUF2891)
    cl00155
    Location:101 → 131
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

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