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HNRNPM heterogeneous nuclear ribonucleoprotein M [ Python bivittatus (Burmese python) ]

Gene ID: 103054755, updated on 11-Mar-2024

Summary

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Gene symbol
HNRNPM
Gene description
heterogeneous nuclear ribonucleoprotein M
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006536166.1 (25906..47157, complement)

NW_006536166.1Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane 44 Neighboring gene membrane associated ring-CH-type finger 2 Neighboring gene RAB11B, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006536166 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA stability involved in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein M

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006536166.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    25906..47157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007438341.2 → XP_007438403.1  heterogeneous nuclear ribonucleoprotein M isoform X1

    UniProtKB/TrEMBL
    A0A9F2R6X1
    Conserved Domains (4) summary
    COG0724
    Location:556 → 631
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12386
    Location:105 → 178
    RRM2_hnRNPM_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein M (hnRNP M) and similar proteins
    cd12661
    Location:555 → 631
    RRM3_hnRNPM; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
    cl17169
    Location:1 → 43
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_025173247.1 → XP_025029015.1  heterogeneous nuclear ribonucleoprotein M isoform X2

    UniProtKB/TrEMBL
    A0A9F5MYD0
    Conserved Domains (4) summary
    cd12386
    Location:89 → 162
    RRM2_hnRNPM_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein M (hnRNP M) and similar proteins
    cd12661
    Location:539 → 615
    RRM3_hnRNPM; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
    cl17169
    Location:1 → 27
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl25887
    Location:87 → 273
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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