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ITGB5 integrin subunit beta 5 [ Python bivittatus (Burmese python) ]

Gene ID: 103054002, updated on 11-Mar-2024

Summary

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Gene symbol
ITGB5
Gene description
integrin subunit beta 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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See ITGB5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006533268.1 (26309..109950)

NW_006533268.1Genomic Context describing neighboring genes Neighboring gene mucin 13, cell surface associated Neighboring gene uridine monophosphate synthetase Neighboring gene kalirin RhoGEF kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006533268 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-5
Names
integrin, beta 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006533268.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    26309..109950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007429630.2 → XP_007429692.1  integrin beta-5

    UniProtKB/TrEMBL
    A0A9F2QXA7
    Conserved Domains (3) summary
    pfam00362
    Location:39 → 467
    Integrin_beta; Integrin, beta chain
    pfam07965
    Location:639 → 722
    Integrin_B_tail; Integrin beta tail domain
    pfam08725
    Location:749 → 792
    Integrin_b_cyt; Integrin beta cytoplasmic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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