U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

OPTN optineurin [ Python bivittatus (Burmese python) ]

Gene ID: 103048805, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
OPTN
Gene description
optineurin
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006538748.1 (15599..42018)

NW_006538748.1Genomic Context describing neighboring genes Neighboring gene protein MCM10 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006538748 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi ribbon formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
optineurin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006538748.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    15599..42018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007442288.3 → XP_007442350.1  optineurin isoform X1

    See identical proteins and their annotated locations for XP_007442350.1

    UniProtKB/TrEMBL
    A0A9F2WJP8
    Conserved Domains (2) summary
    pfam11577
    Location:38 → 104
    NEMO; NF-kappa-B essential modulator NEMO
    pfam16516
    Location:394 → 494
    CC2-LZ; Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator

  2. XM_025175734.1 → XP_025031502.1  optineurin isoform X2

    UniProtKB/TrEMBL
    A0A9F5J2H2
    Conserved Domains (3) summary
    pfam11577
    Location:38 → 104
    NEMO; NF-kappa-B essential modulator NEMO
    pfam16516
    Location:412 → 494
    CC2-LZ; Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
    cl25732
    Location:70 → 396
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.