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mcts1 MCTS1 re-initiation and release factor [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103047726, updated on 11-Mar-2024

Summary

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Gene symbol
mcts1
Gene description
MCTS1 re-initiation and release factor
See related
EnsemblRapid:ENSAMXG00025031789
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 10 NC_064417.1 (48773972..48783486)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 24 NC_035920.1 (45975432..45984738)

Chromosome 10 - NC_064417.1Genomic Context describing neighboring genes Neighboring gene lysosomal-associated membrane protein 2 Neighboring gene cullin 4B Neighboring gene C1GALT1-specific chaperone 1 Neighboring gene uncharacterized LOC111195812 Neighboring gene zinc finger DHHC-type palmitoyltransferase 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in formation of translation preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malignant T-cell-amplified sequence 1
Names
malignant T cell amplified sequence 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064417.1 Reference AstMex3_surface

    Range
    48773972..48783486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015607131.3 → XP_015462617.1  malignant T-cell-amplified sequence 1

    UniProtKB/TrEMBL
    A0A3B1JYP3, A0A8B9HN02
    Related
    ENSAMXP00025051715.1, ENSAMXT00025066722.1
    Conserved Domains (2) summary
    cd11609
    Location:4 → 80
    MCT1_N; N-terminal domain of multiple copies T cell malignancies 1 and related proteins
    cd21155
    Location:80 → 175
    PUA_MCTS-1-like; PUA RNA-binding domain of malignant T cell-amplified sequence 1 and related proteins
Nucleotide Protein
Heading Accession and Version

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