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trappc12 trafficking protein particle complex subunit 12 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103047221, updated on 11-Mar-2024

Summary

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Gene symbol
trappc12
Gene description
trafficking protein particle complex subunit 12
See related
EnsemblRapid:ENSAMXG00025007841
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 14 NC_064421.1 (12492843..12538859, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 9 NC_035905.1 (29216720..29264941, complement)

Chromosome 14 - NC_064421.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111194345 Neighboring gene presenilin 1 Neighboring gene acireductone dioxygenase 1 Neighboring gene EARP complex and GARP complex interacting protein 1 Neighboring gene myelin transcription factor 1-like, b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 12
Names
trafficking protein particle complex 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064421.1 Reference AstMex3_surface

    Range
    12492843..12538859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007257301.4 → XP_007257363.3  trafficking protein particle complex subunit 12

    Related
    ENSAMXP00025010710.1, ENSAMXT00025015209.1
Nucleotide Protein
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