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kntc1 kinetochore associated 1 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103046945, updated on 11-Mar-2024

Summary

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Gene symbol
kntc1
Gene description
kinetochore associated 1
See related
EnsemblRapid:ENSAMXG00025036059
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
61
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 22 NC_064429.1 (3321990..3382050, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172884.1 (3925059..4002673)

Chromosome 22 - NC_064429.1Genomic Context describing neighboring genes Neighboring gene zinc finger, CCHC domain containing 8 Neighboring gene CAP-GLY domain containing linker protein 1a Neighboring gene uncharacterized LOC111191577 Neighboring gene slingshot protein phosphatase 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic sister chromatid segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to kinetochore involved in kinetochore assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RZZ complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinetochore-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064429.1 Reference AstMex3_surface

    Range
    3321990..3382050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022666854.2 → XP_022522575.2  kinetochore-associated protein 1

    Related
    ENSAMXP00025062927.1, ENSAMXT00025079546.1
Nucleotide Protein
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Gene LinkOut

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