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ripk1l receptor (TNFRSF)-interacting serine-threonine kinase 1, like [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103045920, updated on 11-Mar-2024

Summary

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Gene symbol
ripk1l
Gene description
receptor (TNFRSF)-interacting serine-threonine kinase 1, like
See related
EnsemblRapid:ENSAMXG00025001183
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
ripk1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 8 NC_064415.1 (8702300..8728949, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 16 NC_035912.1 (20088296..20115213)

Chromosome 8 - NC_064415.1Genomic Context describing neighboring genes Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like Neighboring gene opsin-5-like Neighboring gene dual specificity phosphatase 22b Neighboring gene interferon regulatory factor 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables JUN kinase kinase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-interacting serine/threonine-protein kinase 1
Names
receptor interacting serine/threonine kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064415.1 Reference AstMex3_surface

    Range
    8702300..8728949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007240884.4 → XP_007240946.3  receptor-interacting serine/threonine-protein kinase 1

  2. XM_049482061.1 → XP_049338018.1  receptor-interacting serine/threonine-protein kinase 1

    Related
    ENSAMXP00025002133.1, ENSAMXT00025002492.1

  3. XM_049482060.1 → XP_049338017.1  receptor-interacting serine/threonine-protein kinase 1

Nucleotide Protein
Heading Accession and Version

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