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LOC103042434 histone-lysine N-methyltransferase PRDM9 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103042434, updated on 25-Jan-2024

Summary

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Gene symbol
LOC103042434
Gene description
histone-lysine N-methyltransferase PRDM9
See related
EnsemblRapid:ENSAMXG00025044068
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
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Genomic context

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Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 11 NC_064418.1 (282467..289322)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172900.1 (89156..103400)

Chromosome 11 - NC_064418.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase Nek5 Neighboring gene integral membrane protein 2Bb Neighboring gene gastrula zinc finger protein XlCGF49.1 Neighboring gene gastrula zinc finger protein XlCGF49.1-like Neighboring gene leucine-rich repeat-containing protein 63

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase PRDM9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064418.1 Reference AstMex3_surface

    Range
    282467..289322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022667274.2 → XP_022522995.2  histone-lysine N-methyltransferase PRDM9

    Related
    ENSAMXP00025073932.1, ENSAMXT00025096623.1
Nucleotide Protein
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