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crtc1b CREB regulated transcription coactivator 1b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103042200, updated on 3-Apr-2024

Summary

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Gene symbol
crtc1b
Gene description
CREB regulated transcription coactivator 1b
See related
EnsemblRapid:ENSAMXG00025039605
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
crtc1
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Genomic context

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Location:
chromosome: 16
Exon count:
12
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 16 NC_064423.1 (19578902..19595077, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 5 NC_035901.1 (17272267..17288408, complement)

Chromosome 16 - NC_064423.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 38A Neighboring gene cartilage oligomeric matrix protein Neighboring gene kelch-like family member 26 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 49

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cAMP response element binding protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of CREB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homotetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CREB-regulated transcription coactivator 1
Names
CREB regulated transcription coactivator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064423.1 Reference AstMex3_surface

    Range
    19578902..19595077 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049465805.1 → XP_049321762.1  CREB-regulated transcription coactivator 1 isoform X3

    UniProtKB/TrEMBL
    A0A3B1IDV1

  2. XM_049465803.1 → XP_049321760.1  CREB-regulated transcription coactivator 1 isoform X2

  3. XM_049465802.1 → XP_049321759.1  CREB-regulated transcription coactivator 1 isoform X1

    Related
    ENSAMXP00025068459.1, ENSAMXT00025087301.1
Nucleotide Protein
Heading Accession and Version

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