U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

polr1h RNA polymerase I subunit H [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103041786, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
polr1h
Gene description
RNA polymerase I subunit H
See related
EnsemblRapid:ENSAMXG00025016481
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
znrd1
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See polr1h in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 3 NC_064410.1 (37557103..37560047, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 23 NC_035919.1 (16226559..16229775, complement)

Chromosome 3 - NC_064410.1Genomic Context describing neighboring genes Neighboring gene SH3-binding domain protein 5-like, b Neighboring gene general transcription factor IIH, polypeptide 4 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B Neighboring gene alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in termination of RNA polymerase I transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA-directed RNA polymerase I subunit RPA12
Names
zinc ribbon domain containing 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064410.1 Reference AstMex3_surface

    Range
    37557103..37560047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007231721.4 → XP_007231783.1  DNA-directed RNA polymerase I subunit RPA12

    See identical proteins and their annotated locations for XP_007231783.1

    UniProtKB/TrEMBL
    A0A8B9JB37, W5LEX8
    Conserved Domains (2) summary
    COG1594
    Location:10 → 117
    RPB9; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription]
    cd10507
    Location:71 → 117
    Zn-ribbon_RPA12; C-terminal zinc ribbon domain of RPA12 subunit of RNA polymerase I

  2. XM_049475292.1 → XP_049331249.1  DNA-directed RNA polymerase I subunit RPA12

    UniProtKB/TrEMBL
    A0A8B9JB37, W5LEX8
    Related
    ENSAMXP00025019522.1, ENSAMXT00025029314.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.