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xkr6a XK, Kell blood group complex subunit-related family, member 6a [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103041060, updated on 16-Mar-2024

Summary

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Gene symbol
xkr6a
Gene description
XK, Kell blood group complex subunit-related family, member 6a
See related
EnsemblRapid:ENSAMXG00025026632
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
xkr6
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 14
Exon count:
3
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 14 NC_064421.1 (17243678..17271430, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 9 NC_035905.1 (25045713..25071105)

Chromosome 14 - NC_064421.1Genomic Context describing neighboring genes Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 4 Neighboring gene family with sequence similarity 167 member Aa Neighboring gene L-threonine 3-dehydrogenase, mitochondrial Neighboring gene chromosome 14 C8orf74 homolog Neighboring gene rp1 like 1a Neighboring gene tyrosine-protein kinase SRK3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 6
Names
XK related 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064421.1 Reference AstMex3_surface

    Range
    17243678..17271430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007252038.4 → XP_007252100.2  XK-related protein 6

    UniProtKB/TrEMBL
    A0A8B9H9N7, A0A8T2LFQ4, W5JZY2
    Related
    ENSAMXP00025043515.1, ENSAMXT00025055581.1
    Conserved Domains (1) summary
    pfam09815
    Location:83 → 431
    XK-related; XK-related protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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