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znf385d zinc finger protein 385D [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103040352, updated on 11-Mar-2024

Summary

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Gene symbol
znf385d
Gene description
zinc finger protein 385D
See related
EnsemblRapid:ENSAMXG00025033704
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (119176851..119317357, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 18 NC_035914.1 (31381217..31514641)

Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene EF-hand domain family, member B Neighboring gene RAB5A, member RAS oncogene family, b Neighboring gene uncharacterized LOC125784412 Neighboring gene uncharacterized LOC125784409 Neighboring gene uncharacterized LOC111194815 Neighboring gene solute carrier family 9 member A1a Neighboring gene family with sequence similarity 110 member D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 385D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064408.1 Reference AstMex3_surface

    Range
    119176851..119317357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049467585.1 → XP_049323542.1  zinc finger protein 385D isoform X3

  2. XM_049467584.1 → XP_049323541.1  zinc finger protein 385D isoform X2

    Related
    ENSAMXP00025056727.1, ENSAMXT00025072309.1

  3. XM_049467583.1 → XP_049323540.1  zinc finger protein 385D isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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