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nudcd2 NudC domain containing 2 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103040151, updated on 11-Mar-2024

Summary

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Gene symbol
nudcd2
Gene description
NudC domain containing 2
See related
EnsemblRapid:ENSAMXG00025012307
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 2 NC_064409.1 (72083503..72092117)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 8 NC_035904.1 (5130602..5137613, complement)

Chromosome 2 - NC_064409.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor subunit beta2a Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha6a Neighboring gene septin-8-A Neighboring gene cyclin G1 Neighboring gene uncharacterized LOC125799069

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nudC domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064409.1 Reference AstMex3_surface

    Range
    72083503..72092117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007253632.4 → XP_007253694.1  nudC domain-containing protein 2

    UniProtKB/TrEMBL
    A0A8B9JAY3, W5LI63
    Related
    ENSAMXP00025016008.1, ENSAMXT00025022808.1
    Conserved Domains (1) summary
    cd06494
    Location:12 → 104
    p23_NUDCD2_like; p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins. Little is known about the function of the proteins in this subgroup.
Nucleotide Protein
Heading Accession and Version

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