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tp53bp1 tumor protein p53 binding protein, 1 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103038748, updated on 11-Mar-2024

Summary

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Gene symbol
tp53bp1
Gene description
tumor protein p53 binding protein, 1
See related
EnsemblRapid:ENSAMXG00025011420
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
30
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 23 NC_064430.1 (32370848..32416219)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172829.1 (4054049..4099091)

Chromosome 23 - NC_064430.1Genomic Context describing neighboring genes Neighboring gene diphosphoinositol pentakisphosphate kinase 1a Neighboring gene uncharacterized LOC125787227 Neighboring gene microtubule-associated protein 1Aa Neighboring gene tubulin gamma complex component 4 Neighboring gene CDKN2A interacting protein Neighboring gene cocaine- and amphetamine-regulated transcript 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TP53-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064430.1 Reference AstMex3_surface

    Range
    32370848..32416219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049471391.1 → XP_049327348.1  TP53-binding protein 1 isoform X1

  2. XM_022665132.2 → XP_022520853.2  TP53-binding protein 1 isoform X1

  3. XM_049471388.1 → XP_049327345.1  TP53-binding protein 1 isoform X1

  4. XM_049471394.1 → XP_049327351.1  TP53-binding protein 1 isoform X4

    Related
    ENSAMXP00025014282.1, ENSAMXT00025020772.1

  5. XM_049471392.1 → XP_049327349.1  TP53-binding protein 1 isoform X2

    Related
    ENSAMXP00025014294.1, ENSAMXT00025020791.1

  6. XM_049471393.1 → XP_049327350.1  TP53-binding protein 1 isoform X3

  7. XM_049471389.1 → XP_049327346.1  TP53-binding protein 1 isoform X1

  8. XM_049471390.1 → XP_049327347.1  TP53-binding protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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