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pde4d phosphodiesterase 4D, cAMP-specific [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103036032, updated on 11-Mar-2024

Summary

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Gene symbol
pde4d
Gene description
phosphodiesterase 4D, cAMP-specific
See related
EnsemblRapid:ENSAMXG00025000014
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
19
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 12 NC_064419.1 (50759682..50836655)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019171687.1 (17885..83561, complement)

Chromosome 12 - NC_064419.1Genomic Context describing neighboring genes Neighboring gene excision repair cross-complementation group 8 Neighboring gene ELOVL fatty acid elongase 7a Neighboring gene uncharacterized LOC125806074 Neighboring gene uncharacterized LOC125806075 Neighboring gene pleckstrin homology-like domain family A member 1 Neighboring gene RAB3C, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064419.1 Reference AstMex3_surface

    Range
    50759682..50836655
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049485602.1 → XP_049341559.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1

    Related
    ENSAMXP00025000040.1, ENSAMXT00025000040.1

  2. XM_049485606.1 → XP_049341563.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X5

    Related
    ENSAMXP00025000039.1, ENSAMXT00025000039.1

  3. XM_049485604.1 → XP_049341561.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3

    Related
    ENSAMXP00025000038.1, ENSAMXT00025000038.1

  4. XM_049485603.1 → XP_049341560.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2

    Related
    ENSAMXP00025000037.1, ENSAMXT00025000037.1

  5. XM_049485605.1 → XP_049341562.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X4

    Related
    ENSAMXP00025000035.1, ENSAMXT00025000035.1
Nucleotide Protein
Heading Accession and Version

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