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timeless timeless circadian clock [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103032261, updated on 11-Mar-2024

Summary

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Gene symbol
timeless
Gene description
timeless circadian clock
See related
EnsemblRapid:ENSAMXG00025035060
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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See timeless in Genome Data Viewer
Location:
chromosome: 24
Exon count:
32
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 24 NC_064431.1 (13111500..13191035)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 22 NC_035918.1 (13315748..13341714)

Chromosome 24 - NC_064431.1Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator-activated receptor gamma Neighboring gene uncharacterized LOC125787582 Neighboring gene metalloproteinase inhibitor 4 Neighboring gene synapsin IIb Neighboring gene uncharacterized LOC125787433 Neighboring gene uncharacterized LOC125787435 Neighboring gene uncharacterized LOC125787431 Neighboring gene uncharacterized LOC125787432 Neighboring gene transmembrane protein 198 Neighboring gene matrix metallopeptidase 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork arrest IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of replication fork protection complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein timeless homolog
Names
timeless circadian regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064431.1 Reference AstMex3_surface

    Range
    13111500..13191035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007229639.4 → XP_007229701.3  protein timeless homolog isoform X1

    Related
    ENSAMXP00025059860.1, ENSAMXT00025076083.1

  2. XM_015605085.3 → XP_015460571.3  protein timeless homolog isoform X1

    Related
    ENSAMXP00025059845.1, ENSAMXT00025076068.1

  3. XM_015605089.3 → XP_015460575.3  protein timeless homolog isoform X2

    Related
    ENSAMXP00025059849.1, ENSAMXT00025076072.1

  4. XM_015605087.3 → XP_015460573.3  protein timeless homolog isoform X1

Nucleotide Protein
Heading Accession and Version

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