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lipeb lipase, hormone-sensitive b [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103030794, updated on 3-Apr-2024

Summary

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Gene symbol
lipeb
Gene description
lipase, hormone-sensitive b
See related
EnsemblRapid:ENSAMXG00025003226
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
lipe
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (109072145..109111236, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 3 NC_035899.1 (7704628..7745239)

Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L17 Neighboring gene transmembrane protein 145 Neighboring gene CD79a molecule, immunoglobulin-associated alpha Neighboring gene Rho guanine nucleotide exchange factor (GEF) 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sterol esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triglyceride lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hormone-sensitive lipase
Names
lipase E, hormone sensitive type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064408.1 Reference AstMex3_surface

    Range
    109072145..109111236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015601076.3 → XP_015456562.1  hormone-sensitive lipase isoform X5

    UniProtKB/TrEMBL
    A0A8T2MGM6
    Conserved Domains (3) summary
    COG0657
    Location:345 → 499
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam06350
    Location:6 → 326
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    cl21494
    Location:355 → 497
    Abhydrolase; alpha/beta hydrolases

  2. XM_007232441.3 → XP_007232503.1  hormone-sensitive lipase isoform X2

    UniProtKB/TrEMBL
    W5L7G9
    Related
    ENSAMXP00025003893.1, ENSAMXT00025005800.1
    Conserved Domains (3) summary
    COG0657
    Location:366 → 520
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam06350
    Location:36 → 347
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    cl21494
    Location:376 → 518
    Abhydrolase; alpha/beta hydrolases

  3. XM_007232440.3 → XP_007232502.1  hormone-sensitive lipase isoform X1

    UniProtKB/TrEMBL
    A0A8T2MGM6
    Related
    ENSAMXP00025003840.1, ENSAMXT00025005715.1
    Conserved Domains (3) summary
    COG0657
    Location:375 → 529
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam06350
    Location:36 → 356
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    cl21494
    Location:385 → 527
    Abhydrolase; alpha/beta hydrolases

  4. XM_022679769.2 → XP_022535490.1  hormone-sensitive lipase isoform X3

    UniProtKB/TrEMBL
    A0A8T2MGM6
    Conserved Domains (2) summary
    pfam06350
    Location:18 → 338
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    cl21494
    Location:367 → 509
    Abhydrolase; alpha/beta hydrolases

  5. XM_049464144.1 → XP_049320101.1  hormone-sensitive lipase isoform X4

    Related
    ENSAMXP00025003837.1, ENSAMXT00025005710.1
Nucleotide Protein
Heading Accession and Version

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