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efr3a EFR3 homolog A (S. cerevisiae) [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103025315, updated on 3-Apr-2024

Summary

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Gene symbol
efr3a
Gene description
EFR3 homolog A (S. cerevisiae)
See related
EnsemblRapid:ENSAMXG00025035650
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 4 NC_064411.1 (28957033..29067962)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 17 NC_035913.1 (24188500..24306775, complement)

Chromosome 4 - NC_064411.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111194591 Neighboring gene adenylate cyclase 8 (brain) Neighboring gene uncharacterized LOC125801088 Neighboring gene HERV-H LTR-associating protein 1 Neighboring gene otoconin 90

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein EFR3 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064411.1 Reference AstMex3_surface

    Range
    28957033..29067962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022679258.2 → XP_022534979.2  protein EFR3 homolog A isoform X4

    Related
    ENSAMXP00025061913.1, ENSAMXT00025078480.1

  2. XM_022679257.2 → XP_022534978.2  protein EFR3 homolog A isoform X4

    Related
    ENSAMXP00025061909.1, ENSAMXT00025078474.1

  3. XM_022679256.2 → XP_022534977.2  protein EFR3 homolog A isoform X3

  4. XM_022679254.2 → XP_022534975.2  protein EFR3 homolog A isoform X1

    UniProtKB/TrEMBL
    A0A8T2M9I9

  5. XM_022679255.2 → XP_022534976.2  protein EFR3 homolog A isoform X2

    Related
    ENSAMXP00025061785.1, ENSAMXT00025078283.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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