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hgh1 HGH1 homolog (S. cerevisiae) [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103022223, updated on 11-Mar-2024

Summary

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Gene symbol
hgh1
Gene description
HGH1 homolog (S. cerevisiae)
See related
EnsemblRapid:ENSAMXG00025000713
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 3 NC_064410.1 (65183811..65195160)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019171540.1 (166292..177180)

Chromosome 3 - NC_064410.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 3, member Bb Neighboring gene exosome component 7 Neighboring gene BOP1 ribosomal biogenesis factor Neighboring gene scleraxis bHLH transcription factor a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein HGH1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064410.1 Reference AstMex3_surface

    Range
    65183811..65195160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022662214.2 → XP_022517935.1  protein HGH1 homolog

    UniProtKB/TrEMBL
    A0A3B1JHG4, A0A8B9HJA6, A0A8T2MDY6
    Related
    ENSAMXP00025001615.1, ENSAMXT00025001743.1
    Conserved Domains (3) summary
    sd00043
    Location:50 → 75
    ARM; armadillo repeat [structural motif]
    pfam04063
    Location:99 → 270
    DUF383; Domain of unknown function (DUF383)
    pfam04064
    Location:275 → 327
    DUF384; Domain of unknown function (DUF384)
Nucleotide Protein
Heading Accession and Version

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