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SNAPC5 small nuclear RNA activating complex polypeptide 5 [ Homo sapiens (human) ]

Gene ID: 10302, updated on 26-May-2016
Official Symbol
SNAPC5provided by HGNC
Official Full Name
small nuclear RNA activating complex polypeptide 5provided by HGNC
Primary source
HGNC:HGNC:15484
See related
Ensembl:ENSG00000174446 HPRD:16183; MIM:605979; Vega:OTTHUMG00000133195
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SNAP19
Orthologs
Location:
15q22.31
Exon count:
4
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 15 NC_000015.10 (66490328..66497808, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (66782666..66790146, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase 1 Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex subunit F2 pseudogene 6 Neighboring gene ribosomal protein L35a pseudogene 32 Neighboring gene microRNA 4512 Neighboring gene small nucleolar RNA, C/D box 18C Neighboring gene small nucleolar RNA, C/D box 18B Neighboring gene ribosomal protein L4

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
transcription factor activity, sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
snRNA transcription from RNA polymerase II promoter TAS
Traceable Author Statement
more info
 
transcription from RNA polymerase II promoter TAS
Traceable Author Statement
more info
PubMed 
transcription initiation from RNA polymerase III promoter IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleolus IDA
Inferred from Direct Assay
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
nucleus IDA
Inferred from Direct Assay
more info
 
Preferred Names
snRNA-activating protein complex subunit 5
Names
CTD-3185P2.1
SNAPc 19 kDa subunit
SNAPc subunit 5
small nuclear RNA activating complex, polypeptide 5, 19kD
small nuclear RNA activating complex, polypeptide 5, 19kDa
small nuclear RNA-activating complex polypeptide 5
snRNA-activating protein complex 19 kDa subunit

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_006049.2NP_006040.1  snRNA-activating protein complex subunit 5

    See identical proteins and their annotated locations for NP_006040.1

    Status: VALIDATED

    Source sequence(s)
    AF093593, CD685245, CN347010, DB037177
    Consensus CDS
    CCDS10217.1
    UniProtKB/Swiss-Prot
    O75971
    UniProtKB/TrEMBL
    A0A024R5X1
    Related
    ENSP00000378954, OTTHUMP00000249452, ENST00000395589, OTTHUMT00000420725
    Conserved Domains (1) summary
    pfam15497
    Location:784
    SNAPc19; snRNA-activating protein complex subunit 19, SNAPc subunit 19

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p2 Primary Assembly

    Range
    66490328..66497808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018926.2 Alternate CHM1_1.1

    Range
    66900682..66908152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)