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TNRC6B trinucleotide repeat containing adaptor 6B [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103018893, updated on 11-Mar-2024

Summary

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Gene symbol
TNRC6B
Gene description
trinucleotide repeat containing adaptor 6B
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See TNRC6B in Genome Data Viewer
Location:
chromosome: 11
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 11 NC_080074.1 (8691460..8954479, complement)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006729790.1 (3280408..3528845)

Chromosome 11 - NC_080074.1Genomic Context describing neighboring genes Neighboring gene small G protein signaling modulator 3 Neighboring gene uncharacterized LOC103019888 Neighboring gene adenylosuccinate lyase Neighboring gene U3 small nucleolar ribonucleoprotein protein IMP3-like Neighboring gene family with sequence similarity 83 member F Neighboring gene GRB2 related adaptor protein 2 Neighboring gene transfer RNA arginine (anticodon CCG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trinucleotide repeat-containing gene 6B protein
Names
trinucleotide repeat containing 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080074.1 Reference mBalAcu1.1

    Range
    8691460..8954479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007189093.3 → XP_007189155.2  trinucleotide repeat-containing gene 6B protein isoform X3

  2. XM_007189092.3 → XP_007189154.2  trinucleotide repeat-containing gene 6B protein isoform X1

  3. XM_057557034.1 → XP_057413017.1  trinucleotide repeat-containing gene 6B protein isoform X2

  4. XM_007189095.3 → XP_007189157.2  trinucleotide repeat-containing gene 6B protein isoform X4

RNA

  1. XR_009009751.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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