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SYTL2 synaptotagmin like 2 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103002334, updated on 11-Mar-2024

Summary

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Gene symbol
SYTL2
Gene description
synaptotagmin like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 9 NC_080072.1 (64964875..65065607, complement)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006725521.1 (3457914..3558383)

Chromosome 9 - NC_080072.1Genomic Context describing neighboring genes Neighboring gene CREB/ATF bZIP transcription factor Neighboring gene coiled-coil domain containing 89 Neighboring gene coiled-coil domain containing 83 Neighboring gene phosphatidylinositol binding clathrin assembly protein Neighboring gene uncharacterized LOC103001869

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080072.1 Reference mBalAcu1.1

    Range
    64964875..65065607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057553190.1 → XP_057409173.1  synaptotagmin-like protein 2 isoform X12

  2. XM_057553189.1 → XP_057409172.1  synaptotagmin-like protein 2 isoform X9

  3. XM_057553191.1 → XP_057409174.1  synaptotagmin-like protein 2 isoform X14

  4. XM_028163129.2 → XP_028018930.1  synaptotagmin-like protein 2 isoform X10

    UniProtKB/TrEMBL
    A0A452C7I2
    Conserved Domains (3) summary
    cd04020
    Location:758 → 914
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:618 → 745
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    pfam02318
    Location:5 → 51
    FYVE_2; FYVE-type zinc finger

  5. XM_007168525.2 → XP_007168587.1  synaptotagmin-like protein 2 isoform X13

    UniProtKB/TrEMBL
    A0A383Z0D6
    Conserved Domains (3) summary
    cd04020
    Location:729 → 885
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:589 → 716
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 51
    PHD_SF; PHD finger superfamily

  6. XM_007168523.2 → XP_007168585.1  synaptotagmin-like protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A383Z0D5
    Conserved Domains (3) summary
    cd04020
    Location:769 → 925
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:629 → 756
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 51
    PHD_SF; PHD finger superfamily

  7. XM_007168521.2 → XP_007168583.1  synaptotagmin-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A383Z0A4
    Conserved Domains (3) summary
    cd04020
    Location:786 → 942
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:646 → 773
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 51
    PHD_SF; PHD finger superfamily

  8. XM_007168524.2 → XP_007168586.1  synaptotagmin-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A383Z0K4
    Conserved Domains (3) summary
    cd04020
    Location:745 → 901
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:605 → 732
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 51
    PHD_SF; PHD finger superfamily

  9. XM_007168522.2 → XP_007168584.1  synaptotagmin-like protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A383Z118
    Conserved Domains (3) summary
    cd04020
    Location:785 → 941
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd08393
    Location:645 → 772
    C2A_SLP-1_2; C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2
    cl22851
    Location:5 → 51
    PHD_SF; PHD finger superfamily

  10. XM_057553187.1 → XP_057409170.1  synaptotagmin-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A383Z0A4

  11. XM_057553188.1 → XP_057409171.1  synaptotagmin-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A383Z0A4

  12. XM_057553186.1 → XP_057409169.1  synaptotagmin-like protein 2 isoform X5

  13. XM_057553183.1 → XP_057409166.1  synaptotagmin-like protein 2 isoform X3

  14. XM_057553182.1 → XP_057409165.1  synaptotagmin-like protein 2 isoform X2

  15. XM_057553185.1 → XP_057409168.1  synaptotagmin-like protein 2 isoform X4

  16. XM_007168519.2 → XP_007168581.2  synaptotagmin-like protein 2 isoform X1

  17. XM_007168514.2 → XP_007168576.2  synaptotagmin-like protein 2 isoform X19

  18. XM_057553195.1 → XP_057409178.1  synaptotagmin-like protein 2 isoform X16

    UniProtKB/TrEMBL
    A0A383Z123

  19. XM_057553193.1 → XP_057409176.1  synaptotagmin-like protein 2 isoform X16

    UniProtKB/TrEMBL
    A0A383Z123

  20. XM_057553192.1 → XP_057409175.1  synaptotagmin-like protein 2 isoform X15

    UniProtKB/TrEMBL
    A0A383Z0A9

  21. XM_057553196.1 → XP_057409179.1  synaptotagmin-like protein 2 isoform X17

  22. XM_057553197.1 → XP_057409180.1  synaptotagmin-like protein 2 isoform X18

Nucleotide Protein
Heading Accession and Version

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