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CHORDC1 cysteine and histidine rich domain containing 1 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103002154, updated on 11-Mar-2024

Summary

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Gene symbol
CHORDC1
Gene description
cysteine and histidine rich domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 9 NC_080072.1 (68723956..68745429, complement)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006729678.1 (28946545..28968000, complement)

Chromosome 9 - NC_080072.1Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing protein 77 Neighboring gene N-acetylated alpha-linked acidic dipeptidase 2 Neighboring gene mitochondrial import receptor subunit TOM6 homolog Neighboring gene uncharacterized LOC103001966 Neighboring gene disks large homolog 3-like Neighboring gene small nucleolar RNA SNORA24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centrosome duplication IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine and histidine-rich domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080072.1 Reference mBalAcu1.1

    Range
    68723956..68745429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007188913.3 → XP_007188975.1  cysteine and histidine-rich domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A384ANR7
    Conserved Domains (2) summary
    cd06488
    Location:193 → 279
    p23_melusin_like; p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins. Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta ...
    pfam04968
    Location:118 → 179
    CHORD

  2. XM_007188912.3 → XP_007188974.1  cysteine and histidine-rich domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A384AP74
    Conserved Domains (2) summary
    cd06488
    Location:230 → 316
    p23_melusin_like; p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins. Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta ...
    pfam04968
    Location:3 → 64
    CHORD
Nucleotide Protein
Heading Accession and Version

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