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RFXANK regulatory factor X associated ankyrin containing protein [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 102998324, updated on 10-Mar-2024

Summary

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Gene symbol
RFXANK
Gene description
regulatory factor X associated ankyrin containing protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 2 NC_080065.1 (172627172..172632742, complement)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006733234.1 (625662..631195, complement)

Chromosome 2 - NC_080065.1Genomic Context describing neighboring genes Neighboring gene neurocan Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene nuclear receptor 2C2 associated protein Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene myocyte enhancer factor 2B Neighboring gene transmembrane protein 161A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein RFXANK

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080065.1 Reference mBalAcu1.1

    Range
    172627172..172632742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007195429.3 → XP_007195491.1  DNA-binding protein RFXANK isoform X1

    See identical proteins and their annotated locations for XP_007195491.1

    UniProtKB/TrEMBL
    A0A384B6Z5
    Conserved Domains (4) summary
    cd00204
    Location:118 → 238
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:128 → 217
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]

  2. XM_007195430.3 → XP_007195492.1  DNA-binding protein RFXANK isoform X2

    UniProtKB/TrEMBL
    A0A384B764
    Conserved Domains (5) summary
    cd00204
    Location:117 → 237
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:127 → 216
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:93 → 143
    Ank_4; Ankyrin repeats (many copies)
    pfam15721
    Location:3 → 81
    ANXA2R; Annexin-2 receptor
    sd00045
    Location:122 → 153
    ANK; ANK repeat [structural motif]

  3. XM_028162181.2 → XP_028017982.1  DNA-binding protein RFXANK isoform X3

    UniProtKB/TrEMBL
    A0A452C4L1
    Conserved Domains (3) summary
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:128 → 210
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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